The DNA sample sequence
>misc_ppid_8090 CTTCGCCAGCCACTCTTAGTCCGCCAGCGCGTGCGGCGGAGGCCGAGCGTCTCTATGATCCTGGCTTCTG GCAACGTCATCGTCACGCGCCGGATCCAACCCCCAACCACTTTAGCCAGCTCTAGAGGCGCGCGTGGCCG GGACGGAAGTGCGCGCGGGTGTCGCCGGGAGTGCGCGCTCCTCTGGCTGACGGGCGGGCCGGGCATGCGC CGCGGGCGTTTTGGCGGGAAGCGCGGGGCGGGCCGGACAATGAGAGTGTCCGCCTCC >misc_ppid_7576 GTAGTCAGCAGAGCGGAATCTAGGAAGGCTCCTTTCCCGCGGCGCCCTGGAGGCGGGGGCCCCACCTTCC CACGCAGGCGCTATCAAGCCCCGCCTCCTCACCCGCCCGCGGCGTGGCGTCGGAAAGAGCCCTCAGCCCC TCCCTCTCTGGCGCTGATACCCAATGGGCAGCCTCAGGCCTTTAGCGGGGGCGGGGCACCCCCTGGACGC CGTTCTGGTTGGCCCGCGGCCCGGCGCAGCGCATGACGTTATTAC >misc_ppid_3934 CGCCTCCGAAAGAGGATAGGCCCAGCCTTTTTCCTTAGTCTAACCCCCGAGAAAGGCCTGTGTGGGCAAC GCCCCCGCAGTTGACCTATCAGCACTATCGCCACGCCCACCAGCCAGAGTCCTGTCCTCTCAGAGGCTCC CTATACTTATCGATGGCCCCGCCCCCTCTGGATCTCTTACTCTAGCCCCGCCTGCTTCATTACTCCCTCC CCTTCCGCTCCCACACACCGTCCCCGCCCCATCTGTCCATCTCTTTCTAGC >misc_ppid_7596 AAGCGTTCAGTACCATGCAGAGCAGCTGGGAGCGGGTCCCGCTGGGCGGGGCCGAGCTGCGCGCGACCCT CGGCGCGCTCGGGGAGGCCCAGACAGGGGTGGCCTCTCTGGCCTCCGCTCCCGCGGGCTCTATGACACCG CACTGGCTCGCGGGACGGGGCGGGGTCGGGTGAGGGGGAGGAGACAGCCCCACGCTTTGCGACTCGCGGT GACCCCTACGCGGAACTCTCTCGCGGTAATTCGAAGTA
If you use the Sliding Window
The Nucleotide Sequences here
>misc_ppid_8090 CGTATCGGAACGGTGACGACAGTAGCAGACTATATAGCAGCAGACATATATAGCAGTATGCTGGAAGATCTCGGACGGAGCAACCGGTCGTGTGTGGAACA >misc_ppid_7953 GGCTCAGCACACACTTCACTGCTGCCGTCCCACACAGGAG CGTATCGGAACGGTGACGACAGTAGCAGACTATATAGCAGCAGACATATATAGCAGTATGCTGGAAGATCTCGGACGGAGCAACCGGTCGTGTGTGGAACA >misc_ppid_6460 CCCGTCTGACATCTCCTGTT CGTATCGGAACGGTGACGACAGTAGCAGACTATATAGCAGCAGACATATATAGCAGTATGCTGGAAGATCTCGGACGGAGCAACCGGTCGTGTGTGGAACA >misc_ppid_6461 TTGGTAATAAAGCTGGTTTC CCCGTCTGACATCTCCTGTT >misc_ppid_6462 ATCTTGCAAACAGTCGAGTC ATCTTGCAAACAGTCGAGTC ATCTTGCAAACAGTCGAGTC
The Nucleotide Label Sequences here
>misc_ppid_8090 1 2 2 2 1 1 1 1 2 2 2 0 0 0 0 0 0 2 2 2 2 1 1 1 1 1 3 3 3 3 3 3 3 3 3 3 3 2 2 2 2 2 1 2 1 2 1 2 1 1 1 1 1 2 3 3 3 2 2 2 0 0 0 2 1 0 2 0 3 0 2 0 1 0 2 0 3 0 3 0 2 0 1 0 2 3 3 3 2 2 2 2 0 0 0 0 0 1 2 2 3 >misc_ppid_7953 0 0 0 0 0 0 0 0 1 1 1 1 1 2 2 2 2 2 1 1 1 2 2 2 2 2 2 0 0 0 1 3 3 3 3 2 1 1 1 1 1 2 2 2 1 1 1 1 2 2 2 0 0 0 0 0 0 2 2 2 2 1 1 1 1 1 3 3 3 3 3 3 3 3 3 3 3 2 2 2 2 2 1 2 1 2 1 2 1 1 1 1 1 2 3 3 3 2 2 2 0 0 0 2 1 0 2 0 3 0 2 0 1 0 2 0 3 0 3 0 2 0 1 0 2 3 3 3 2 2 2 2 0 0 0 0 0 1 2 2 3 >misc_ppid_6460 3 3 3 3 3 2 2 1 1 1 0 0 0 0 2 1 1 2 3 3 1 2 2 2 1 1 1 1 2 2 2 0 0 0 0 0 0 2 2 2 2 1 1 1 1 1 3 3 3 3 3 3 3 3 3 3 3 2 2 2 2 2 1 2 1 2 1 2 1 1 1 1 1 2 3 3 3 2 2 2 0 0 0 2 1 0 2 0 3 0 2 0 1 0 2 0 3 0 3 0 2 0 1 0 2 3 3 3 2 2 2 2 0 0 0 0 0 1 2 2 3 >misc_ppid_6461 0 0 0 1 1 1 1 2 2 2 1 1 1 1 3 3 3 0 1 2 3 3 3 3 3 2 2 1 1 1 0 0 0 0 2 1 1 2 3 3 >misc_ppid_6462 1 1 2 2 3 3 3 1 1 1 0 0 0 0 0 2 2 2 1 1 1 1 2 2 3 3 3 1 1 1 0 0 0 0 0 2 2 2 1 1 1 1 2 2 3 3 3 1 1 1 0 0 0 0 0 2 2 2 1 1