Physicochemical properties,GG,GA,GC,GT,AG,AA,AC,AT,CG,CA,CC,CT,TG,TA,TC,TT Base stacking,-8.260 ,-9.810 ,-14.590 ,-10.510 ,-6.780 ,-5.370 ,-10.510 ,-6.570 ,-9.610 ,-6.570 ,-8.260 ,-6.780 ,-6.570 ,-3.820 ,-9.810 ,-5.370 Protein induced deformability,6.100 ,4.500 ,4.000 ,2.300 ,2.100 ,2.900 ,2.300 ,1.600 ,12.100 ,9.800 ,6.100 ,2.100 ,9.800 ,6.300 ,4.500 ,2.900 B-DNA twist,35.300 ,39.600 ,38.400 ,33.100 ,30.600 ,35.500 ,33.100 ,43.200 ,31.300 ,37.700 ,35.300 ,30.600 ,37.700 ,31.600 ,39.600 ,35.500 Dinucleotide GC Content,2.000 ,1.000 ,2.000 ,1.000 ,1.000 ,0.000 ,1.000 ,0.000 ,2.000 ,1.000 ,2.000 ,1.000 ,1.000 ,0.000 ,1.000 ,0.000 A-philicity,0.190 ,0.980 ,0.730 ,0.130 ,0.330 ,0.970 ,0.130 ,0.580 ,0.520 ,1.040 ,0.190 ,0.330 ,1.040 ,0.730 ,0.980 ,0.970 Propeller twist,-8.110 ,-13.480 ,-11.080 ,-13.100 ,-14.000 ,-18.660 ,-13.100 ,-15.010 ,-10.030 ,-9.450 ,-8.110 ,-14.000 ,-9.450 ,-11.850 ,-13.480 ,-18.660 Duplex stability-free energy,-2.300 ,-1.500 ,-2.300 ,-1.500 ,-1.500 ,-1.200 ,-1.500 ,-0.900 ,-2.800 ,-1.700 ,-2.300 ,-1.500 ,-1.700 ,-0.900 ,-1.500 ,-1.200 Duplex stability-disrupt energy,3.100 ,1.600 ,3.100 ,1.300 ,1.600 ,1.900 ,1.300 ,0.900 ,3.600 ,1.900 ,3.100 ,1.600 ,1.900 ,1.500 ,1.600 ,1.900 DNA denaturation,99.310 ,80.030 ,135.830 ,108.800 ,85.120 ,66.510 ,108.800 ,72.290 ,88.840 ,64.920 ,99.310 ,85.120 ,64.920 ,50.110 ,80.030 ,66.510 Bending stiffness,130.000 ,60.000 ,85.000 ,60.000 ,60.000 ,35.000 ,60.000 ,20.000 ,85.000 ,60.000 ,130.000 ,60.000 ,60.000 ,20.000 ,60.000 ,35.000 Protein DNA twist,32.900 ,36.300 ,33.600 ,31.500 ,31.900 ,35.100 ,31.500 ,29.300 ,36.100 ,37.300 ,32.900 ,31.900 ,37.300 ,37.800 ,36.300 ,35.100 Stabilising energy of Z-DNA,2.400 ,3.400 ,4.000 ,4.600 ,3.400 ,3.900 ,4.600 ,5.900 ,0.700 ,1.300 ,2.400 ,3.400 ,1.300 ,2.500 ,3.400 ,3.900 Aida_BA_transition,2.260 ,3.180 ,8.280 ,4.520 ,0.790 ,0.960 ,4.520 ,6.820 ,10.790 ,5.100 ,2.260 ,0.790 ,5.100 ,0.420 ,3.180 ,0.960 Breslauer_dG,3.100 ,1.600 ,3.100 ,1.300 ,1.600 ,1.900 ,1.300 ,1.500 ,3.600 ,1.900 ,3.100 ,1.600 ,1.900 ,0.900 ,1.600 ,1.900 Breslauer_dH,11.000 ,5.600 ,11.100 ,6.500 ,7.800 ,9.100 ,6.500 ,8.600 ,11.900 ,5.800 ,11.000 ,7.800 ,5.800 ,6.000 ,5.600 ,9.100 Breslauer_dS,26.600 ,13.500 ,26.700 ,17.300 ,20.800 ,24.000 ,17.300 ,23.900 ,27.800 ,12.900 ,26.600 ,20.800 ,12.900 ,16.900 ,13.500 ,24.000 Electron_interaction,28.200 ,19.800 ,28.200 ,19.800 ,19.800 ,11.400 ,19.800 ,11.400 ,28.200 ,19.800 ,28.200 ,19.800 ,19.800 ,11.400 ,19.800 ,11.400 Hartman_trans_free_energy,2.400 ,2.500 ,0.700 ,1.300 ,3.400 ,3.900 ,1.300 ,2.400 ,4.000 ,4.600 ,2.400 ,3.400 ,4.600 ,5.900 ,2.500 ,3.900 Helix-Coil_transition,13.000 ,6.700 ,13.000 ,5.400 ,6.700 ,7.900 ,5.400 ,6.300 ,15.100 ,7.900 ,13.000 ,6.700 ,7.900 ,3.800 ,6.700 ,7.900 Ivanov_BA_transition,0.190 ,0.980 ,0.730 ,0.130 ,0.330 ,0.970 ,0.130 ,0.580 ,0.520 ,1.040 ,0.190 ,0.330 ,1.040 ,0.730 ,0.980 ,0.970 Lisser_BZ_transition,10.000 ,10.500 ,2.900 ,5.400 ,14.200 ,16.300 ,5.400 ,10.000 ,16.700 ,19.200 ,10.000 ,14.200 ,19.200 ,24.700 ,10.500 ,16.300 Polar_interaction,3.800 ,2.470 ,3.800 ,2.470 ,2.470 ,1.140 ,2.470 ,1.140 ,3.800 ,2.470 ,3.800 ,2.470 ,2.470 ,1.140 ,2.470 ,1.140 SantaLucia_dG,1.770 ,1.460 ,2.280 ,1.430 ,1.160 ,1.020 ,1.430 ,0.730 ,2.090 ,1.380 ,1.770 ,1.160 ,1.380 ,0.600 ,1.460 ,1.020 SantaLucia_dH,6.700 ,7.700 ,11.100 ,8.600 ,6.100 ,8.400 ,8.600 ,6.500 ,10.100 ,7.400 ,6.700 ,6.100 ,7.400 ,6.300 ,7.700 ,8.400 SantaLucia_dS,15.600 ,20.300 ,28.400 ,23.000 ,16.100 ,23.600 ,23.000 ,18.800 ,25.500 ,19.300 ,15.600 ,16.100 ,19.300 ,18.500 ,20.300 ,23.600 Sarai_flexibility,7.200 ,8.800 ,11.100 ,14.600 ,8.200 ,7.600 ,14.600 ,25.000 ,8.900 ,10.900 ,7.200 ,8.200 ,10.900 ,12.500 ,8.800 ,7.600 Stability,85.970 ,86.440 ,136.120 ,97.730 ,58.420 ,54.500 ,97.730 ,57.020 ,54.710 ,72.550 ,54.710 ,85.970 ,58.420 ,36.730 ,86.440 ,54.500 Stacking_energy,8.260 ,9.810 ,14.590 ,10.510 ,6.780 ,5.370 ,10.510 ,6.570 ,9.690 ,6.570 ,8.260 ,6.780 ,6.570 ,3.820 ,9.810 ,5.370 Sugimoto_dG,2.100 ,1.500 ,2.300 ,1.500 ,1.500 ,1.200 ,1.500 ,0.900 ,2.800 ,1.700 ,2.100 ,1.500 ,1.700 ,0.900 ,1.500 ,1.200 Sugimoto_dH,10.900 ,8.800 ,10.500 ,9.400 ,6.600 ,8.000 ,9.400 ,5.600 ,11.800 ,8.200 ,10.900 ,6.600 ,8.200 ,6.600 ,8.800 ,8.000 Sugimoto_dS,28.400 ,23.500 ,26.400 ,25.500 ,16.400 ,21.900 ,25.500 ,15.200 ,29.000 ,21.000 ,28.400 ,16.400 ,21.000 ,18.400 ,23.500 ,21.900 Watson-Crick_interaction,42.000 ,34.000 ,42.000 ,34.000 ,34.000 ,26.000 ,34.000 ,26.000 ,42.000 ,34.000 ,42.000 ,34.000 ,34.000 ,26.000 ,34.000 ,26.000 Twist,0.026 ,0.025 ,0.025 ,0.036 ,0.031 ,0.026 ,0.036 ,0.033 ,0.014 ,0.016 ,0.026 ,0.031 ,0.016 ,0.017 ,0.025 ,0.026 Tilt,0.042 ,0.038 ,0.036 ,0.038 ,0.037 ,0.038 ,0.038 ,0.036 ,0.026 ,0.025 ,0.042 ,0.037 ,0.025 ,0.018 ,0.038 ,0.038 Roll,0.019 ,0.020 ,0.026 ,0.023 ,0.019 ,0.020 ,0.023 ,0.022 ,0.016 ,0.017 ,0.019 ,0.019 ,0.017 ,0.016 ,0.020 ,0.020 Shift,1.430 ,1.320 ,1.200 ,1.320 ,1.460 ,1.690 ,1.320 ,1.030 ,1.080 ,1.070 ,1.430 ,1.460 ,1.070 ,0.720 ,1.320 ,1.690 Slide,1.650 ,1.930 ,2.610 ,3.030 ,2.030 ,2.260 ,3.030 ,3.830 ,2.000 ,1.780 ,1.650 ,2.030 ,1.780 ,1.200 ,1.930 ,2.260 Rise,8.040 ,8.560 ,9.530 ,8.930 ,7.080 ,7.650 ,8.930 ,9.070 ,6.230 ,6.380 ,8.040 ,7.080 ,6.380 ,6.230 ,8.560 ,7.650 Stacking energy,-9.500 ,-11.400 ,-13.200 ,-11.800 ,-11.500 ,-12.000 ,-11.800 ,-10.600 ,-13.100 ,-12.300 ,-9.500 ,-11.500 ,-12.300 ,-11.200 ,-11.400 ,-12.000 Bend,2.160 ,2.510 ,3.060 ,2.970 ,2.310 ,3.070 ,2.970 ,2.600 ,2.810 ,3.580 ,2.160 ,2.310 ,3.580 ,6.740 ,2.510 ,3.070 Tip,0.710 ,1.350 ,2.500 ,2.000 ,0.900 ,1.760 ,2.000 ,1.870 ,0.220 ,-1.640 ,0.710 ,0.900 ,-1.640 ,6.700 ,1.350 ,1.760 Inclination,1.110 ,-0.330 ,0.000 ,0.110 ,-0.920 ,-1.430 ,-0.110 ,0.000 ,0.000 ,1.310 ,-1.110 ,0.920 ,-1.310 ,0.000 ,0.330 ,1.430 Major Groove Width,15.490 ,13.930 ,14.550 ,12.370 ,13.510 ,12.150 ,12.370 ,12.870 ,14.420 ,13.580 ,15.490 ,13.510 ,13.580 ,12.320 ,13.930 ,12.150 Major Groove Depth,8.450 ,8.760 ,8.670 ,9.410 ,8.960 ,9.120 ,9.410 ,8.960 ,8.810 ,8.670 ,8.450 ,8.960 ,8.670 ,9.600 ,8.760 ,9.120 Major Groove Size,3.980 ,3.260 ,3.260 ,3.980 ,4.700 ,3.980 ,3.980 ,4.700 ,4.700 ,3.980 ,3.980 ,4.700 ,3.980 ,3.260 ,3.260 ,3.980 Major Groove Distance,3.380 ,3.400 ,3.040 ,3.030 ,3.360 ,3.380 ,3.030 ,3.020 ,3.770 ,3.790 ,3.380 ,3.360 ,3.790 ,3.810 ,3.400 ,3.380 Minor Groove Width,4.620 ,4.710 ,4.740 ,6.040 ,5.190 ,5.300 ,6.040 ,5.310 ,5.160 ,4.790 ,4.620 ,5.190 ,4.790 ,6.400 ,4.710 ,5.300 Minor Groove Depth,8.990 ,9.110 ,8.980 ,8.790 ,8.980 ,9.030 ,8.790 ,8.910 ,9.060 ,9.090 ,8.990 ,8.980 ,9.090 ,9.000 ,9.110 ,9.030 Minor Groove Size,3.980 ,2.980 ,3.260 ,3.260 ,3.980 ,2.980 ,3.260 ,3.260 ,4.700 ,3.700 ,3.980 ,3.980 ,3.700 ,2.700 ,2.980 ,2.980 Minor Groove Distance,2.800 ,2.950 ,4.240 ,4.220 ,2.790 ,2.940 ,4.220 ,4.200 ,3.210 ,3.090 ,2.800 ,2.790 ,3.090 ,2.970 ,2.950 ,2.940 Persistance Length,130.000 ,60.000 ,85.000 ,60.000 ,60.000 ,35.000 ,60.000 ,20.000 ,85.000 ,60.000 ,130.000 ,60.000 ,60.000 ,20.000 ,60.000 ,35.000 Melting Temperature,85.970 ,86.440 ,136.120 ,97.730 ,58.420 ,54.500 ,97.730 ,57.020 ,72.550 ,54.710 ,85.970 ,58.420 ,54.710 ,36.730 ,86.440 ,54.500 Mobility to bend towards major groove,1.000 ,1.080 ,0.980 ,1.020 ,1.060 ,1.180 ,1.060 ,1.120 ,1.020 ,1.060 ,0.990 ,1.040 ,1.030 ,1.070 ,1.030 ,1.090 Mobility to bend towards minor groove,1.250 ,1.120 ,1.170 ,1.110 ,1.090 ,1.040 ,1.100 ,1.020 ,1.250 ,1.160 ,1.270 ,1.160 ,1.230 ,1.050 ,1.200 ,1.040 Propeller Twist,-12.800 ,-15.100 ,-11.700 ,-6.700 ,-14.300 ,-17.300 ,-6.700 ,-16.900 ,-11.200 ,-8.600 ,-12.800 ,-14.300 ,-8.600 ,-11.100 ,-15.100 ,-17.300 Clash Strength,1.780 ,0.030 ,0.220 ,0.950 ,2.530 ,0.640 ,0.950 ,1.680 ,2.420 ,0.800 ,1.780 ,2.530 ,0.800 ,0.000 ,0.030 ,0.640 Enthalpy,-10.900 ,-8.800 ,-10.500 ,-9.400 ,-6.600 ,-8.000 ,-9.400 ,-5.600 ,-11.800 ,-8.200 ,-10.900 ,-6.600 ,-8.200 ,-6.600 ,-8.800 ,-8.000 Free energy,-1.550 ,-1.120 ,-1.850 ,-1.280 ,-1.170 ,-0.670 ,-1.280 ,-0.620 ,-1.870 ,-1.190 ,-1.550 ,-1.170 ,-1.190 ,-0.700 ,-1.120 ,-0.670 Twist_twist,0.048 ,0.042 ,0.042 ,0.049 ,0.044 ,0.046 ,0.049 ,0.046 ,0.023 ,0.021 ,0.048 ,0.044 ,0.021 ,0.036 ,0.042 ,0.046 Tilt_tilt,0.041 ,0.039 ,0.040 ,0.041 ,0.037 ,0.039 ,0.041 ,0.040 ,0.028 ,0.028 ,0.041 ,0.037 ,0.028 ,0.025 ,0.039 ,0.039 Roll_roll,0.024 ,0.021 ,0.028 ,0.027 ,0.023 ,0.024 ,0.027 ,0.027 ,0.015 ,0.018 ,0.024 ,0.023 ,0.018 ,0.014 ,0.021 ,0.024 Twist_tilt,0.000 ,0.001 ,0.000 ,0.001 ,-0.003 ,0.006 ,0.001 ,0.000 ,0.001 ,-0.001 ,0.000 ,-0.003 ,-0.001 ,-0.001 ,0.001 ,0.006 Twist_roll,0.004 ,0.009 ,0.007 ,0.008 ,0.006 ,0.008 ,0.008 ,0.008 ,0.003 ,0.005 ,0.004 ,0.006 ,0.005 ,0.008 ,0.009 ,0.008 Tilt_roll,-0.001 ,0.000 ,-0.001 ,0.003 ,-0.003 ,0.003 ,0.003 ,0.001 ,0.001 ,0.001 ,-0.001 ,-0.003 ,0.001 ,0.000 ,0.000 ,0.003 Shift_shift,1.984 ,1.430 ,1.761 ,1.341 ,1.657 ,1.975 ,1.341 ,1.193 ,1.346 ,1.600 ,1.984 ,1.657 ,1.600 ,1.529 ,1.430 ,1.975 Slide_slide,3.215 ,2.518 ,2.708 ,2.974 ,2.706 ,2.914 ,2.974 ,3.310 ,2.034 ,2.286 ,3.215 ,2.706 ,2.286 ,2.269 ,2.518 ,2.914 Rise_rise,7.335 ,8.330 ,10.281 ,9.882 ,6.388 ,7.621 ,9.882 ,10.499 ,4.390 ,6.290 ,7.335 ,6.388 ,6.290 ,5.055 ,8.330 ,7.621 Shift_slide,0.057 ,0.026 ,0.318 ,-0.157 ,-0.026 ,0.171 ,-0.157 ,-0.097 ,-0.187 ,-0.283 ,0.057 ,-0.026 ,-0.283 ,0.052 ,0.026 ,0.171 Shift_rise,0.215 ,0.025 ,0.131 ,-0.006 ,-0.032 ,0.192 ,-0.006 ,-0.023 ,-0.041 ,-0.065 ,0.215 ,-0.032 ,-0.065 ,-0.033 ,0.025 ,0.192 Slide_rise,1.196 ,1.153 ,2.558 ,2.593 ,1.320 ,1.382 ,2.593 ,2.481 ,1.467 ,0.816 ,1.196 ,1.320 ,0.816 ,0.913 ,1.153 ,1.382 Twist_shift,0.024 ,-0.001 ,-0.001 ,0.005 ,-0.031 ,0.057 ,0.005 ,-0.008 ,0.023 ,-0.010 ,0.024 ,-0.031 ,-0.010 ,-0.006 ,-0.001 ,0.057 Twist_slide,-0.225 ,-0.206 ,-0.193 ,-0.201 ,-0.176 ,-0.218 ,-0.201 ,-0.116 ,-0.086 ,-0.017 ,-0.225 ,-0.176 ,-0.017 ,-0.093 ,-0.206 ,-0.218 Twist_rise,-0.114 ,-0.128 ,-0.160 ,-0.160 ,-0.144 ,-0.159 ,-0.160 ,-0.089 ,-0.124 ,-0.126 ,-0.114 ,-0.144 ,-0.126 ,-0.093 ,-0.128 ,-0.159 Tilt_shift,-0.065 ,-0.026 ,-0.048 ,-0.005 ,-0.019 ,0.002 ,-0.005 ,0.024 ,-0.052 ,0.004 ,-0.065 ,-0.019 ,0.004 ,0.023 ,-0.026 ,0.002 Tilt_slide,0.005 ,-0.002 ,-0.018 ,-0.013 ,0.008 ,-0.008 ,-0.013 ,-0.010 ,0.010 ,-0.002 ,0.005 ,0.008 ,-0.002 ,0.005 ,-0.002 ,-0.008 Tilt_rise,-0.084 ,-0.083 ,-0.063 ,0.044 ,0.050 ,-0.205 ,0.044 ,0.006 ,0.005 ,-0.016 ,-0.084 ,0.050 ,-0.016 ,-0.003 ,-0.083 ,-0.205 Roll_shift,-0.004 ,0.011 ,-0.002 ,0.014 ,-0.014 ,0.016 ,0.014 ,0.009 ,0.011 ,-0.002 ,-0.004 ,-0.014 ,-0.002 ,-0.010 ,0.011 ,0.016 Roll_slide,-0.007 ,-0.001 ,0.006 ,-0.002 ,-0.029 ,-0.022 ,-0.002 ,-0.050 ,-0.021 ,0.009 ,-0.007 ,-0.029 ,0.009 ,-0.008 ,-0.001 ,-0.022 Roll_rise,0.004 ,-0.012 ,0.126 ,0.109 ,-0.001 ,-0.054 ,0.109 ,0.093 ,-0.020 ,-0.087 ,0.004 ,-0.001 ,-0.087 ,-0.037 ,-0.012 ,-0.054 Slide stiffness,1.650 ,1.930 ,2.610 ,3.030 ,2.030 ,2.260 ,3.030 ,3.830 ,2.000 ,1.780 ,1.650 ,2.030 ,1.780 ,1.200 ,1.930 ,2.260 Shift stiffness,1.430 ,1.320 ,1.200 ,1.320 ,1.460 ,1.690 ,1.320 ,1.030 ,1.080 ,1.070 ,1.430 ,1.460 ,1.070 ,0.720 ,1.320 ,1.690 Roll stiffness,0.019 ,0.020 ,0.026 ,0.023 ,0.019 ,0.020 ,0.023 ,0.022 ,0.016 ,0.017 ,0.019 ,0.019 ,0.017 ,0.016 ,0.020 ,0.020 Rise stiffness,8.040 ,8.560 ,9.530 ,8.930 ,7.080 ,7.650 ,8.930 ,9.070 ,6.230 ,6.380 ,8.040 ,7.080 ,6.380 ,6.230 ,8.560 ,7.650 Tilt stiffness,0.042 ,0.038 ,0.036 ,0.038 ,0.037 ,0.038 ,0.038 ,0.036 ,0.026 ,0.025 ,0.042 ,0.037 ,0.025 ,0.018 ,0.038 ,0.038 Twist stiffness,0.026 ,0.025 ,0.025 ,0.036 ,0.031 ,0.026 ,0.036 ,0.033 ,0.014 ,0.016 ,0.026 ,0.031 ,0.016 ,0.017 ,0.025 ,0.026 Wedge,2.100 ,5.300 ,5.000 ,1.100 ,8.400 ,7.200 ,1.100 ,2.600 ,6.700 ,3.500 ,2.100 ,8.400 ,3.500 ,0.900 ,5.300 ,7.200 Direction,57.000 ,120.000 ,180.000 ,-143.000 ,2.000 ,-154.000 ,143.000 ,0.000 ,0.000 ,-64.000 ,-57.000 ,-2.000 ,64.000 ,0.000 ,-120.000 ,154.000 Flexibility_slide,7.360 ,10.280 ,4.340 ,9.570 ,7.580 ,13.720 ,9.570 ,11.690 ,4.020 ,1.350 ,7.360 ,7.580 ,1.350 ,7.130 ,10.280 ,13.720 Flexibility_shift,5.510 ,5.440 ,1.980 ,9.730 ,8.980 ,5.350 ,9.730 ,1.130 ,12.130 ,4.610 ,5.510 ,8.980 ,4.610 ,4.280 ,5.440 ,5.350 Entropy,-19.900 ,-22.200 ,-24.400 ,-22.400 ,-21.000 ,-21.300 ,-22.400 ,-20.400 ,-27.200 ,-22.700 ,-19.900 ,-21.000 ,-22.700 ,-21.300 ,-22.200 ,-21.300