| server | Read Me | Data | Citation |

Read me

Step 1. Open the web-server by clicking the link http://bioinformatics.hitsz.edu.cn/PSSM-DT/ and you will see the home page. Click on the Read Me button to see a brief introduction about the server.

Step 2. Either type or copy and paste the query protein sequences into the input box. AS this server need calculate PSSM for every protein sequence through PSI-BLAST, which is a time-consuming operation, it receive only a query protein sequence at a time. The input sequence should be in the FASTA format and example sequences in FASTA format can be seen by clicking on the Example button right above the input box.

Step 3. Click on the Submit button to submit the query sequence to the server, then you will see the predicted result on your screen. For example, use the protein 1IGN chain B in Example as query sequence inputting the sever, you will see on your screen that the predict result is "DNA-binding Protein".


Copyright@By Bin Liu's lab, Beijing Institute of Technology.

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