iPiDA-LTR:

identifying piwi-interacting RNA-disease associations based on learning to rank

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Dataset

The piRNA-disease association dataset is divided into different sub-datasets according to two application scenarios.
(1) : all known piRNA-disease association matrix (adjMatrix.txt)
(2) : corresponding piRNA names (all_piRNA_name.txt)
(3) : corresponding disease names (all_disease_name.txt)

For the first application scenario 'identifying missing piRNA-disease associations':
(1) : known piRNA-disease associations (new_associations_PAD_ben.txt) in benchmark dataset.
(2) : piRNA-disease associations (new_associations_PAD_ind.txt) in Independent dataset

For the second application scenario 'mining novel piRNA-associated diseases':
(1) : known piRNAs (known_piRNA.txt) in benchmark dataset.
(2) : query piRNAs (query_piRNA.txt) in Independent dataset.